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Description : substrate adaptor *(FBS) of SCF E3 ubiquitin ligase complex & original description: none
Gene families : OG0001990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001990_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g05457 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G61340 | No alias | F-box family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g28361 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08740 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g13408 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g07740 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene38775.t1 | Aspi01Gene38775 | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G076500.1 | Ceric.01G076500 | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G056900.1 | Ceric.05G056900 | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G033400.1 | Ceric.12G033400 | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09432 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30100 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g37400.1 | LOC_Os07g37400 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g30280.1 | LOC_Os10g30280 | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g14639 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| MA_19354g0010 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g07159 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g42845 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g14675 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62452 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015035 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015888 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24407 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Smo402840 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g033390.3.1 | Solyc03g033390 | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g52237 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08863 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g12923 | No alias | substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | HCCA |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048478 | replication fork protection | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:2000104 | negative regulation of DNA-templated DNA replication | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |