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  5. Aop_g05416

Aop_g05416


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05416
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00077460 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT4G11410 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000204.28 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g06750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43310 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g07148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24464 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019612001 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
GSVIVT01025521001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
GSVIVT01028899001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07922.1 LOC_Os11g07922 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g04488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17256 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
MA_61875g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Msp_g07055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc03g112540.4.1 Solyc03g112540 Short-chain dehydrogenase TIC 32, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g05313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016903_P001 Zm00001e016903 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Zm00001e037925_P002 Zm00001e037925 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Zm00001e040665_P004 Zm00001e040665 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 36 177
No external refs found!