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  5. Aop_g05298

Aop_g05298 (CHUP1)


Aliases : CHUP1

Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05298
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Ala_g25523 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07778 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38296 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45363 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Smo438117 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.02 OrthoFinder output from all 47 species
Smo438203 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!