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  5. Aop_g05233

Aop_g05233


Description : regulatory protein *(ASPM) of microtubule minus-end stability & original description: none


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05233
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00143230 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00062p00144520 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT4G21820 No alias binding;calmodulin binding 0.17 OrthoFinder output from all 47 species
Aspi01Gene14455.t1 Aspi01Gene14455 regulatory protein *(ASPM) of microtubule minus-end... 0.05 OrthoFinder output from all 47 species
Azfi_s0004.g008280 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.07 OrthoFinder output from all 47 species
Ceric.23G023300.1 Ceric.23G023300 regulatory protein *(ASPM) of microtubule minus-end... 0.18 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre06.g281200 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.22 OrthoFinder output from all 47 species
GSVIVT01002377001 No alias No description available 0.13 OrthoFinder output from all 47 species
Gb_33771 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Gb_33772 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g33370.1 LOC_Os07g33370 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g09758 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.12 OrthoFinder output from all 47 species
MA_10431293g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Msp_g38961 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.16 OrthoFinder output from all 47 species
Nbi_g08418 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.24 OrthoFinder output from all 47 species
Ppi_g30759 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.1 OrthoFinder output from all 47 species
Smo419634 No alias No description available 0.08 OrthoFinder output from all 47 species
Solyc02g080400.3.1 Solyc02g080400 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g42097 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.07 OrthoFinder output from all 47 species
Tin_g13979 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 1304 1321
IPR000048 IQ_motif_EF-hand-BS 843 860
IPR000048 IQ_motif_EF-hand-BS 1209 1227
IPR000048 IQ_motif_EF-hand-BS 1068 1086
IPR000048 IQ_motif_EF-hand-BS 1328 1344
IPR000048 IQ_motif_EF-hand-BS 1399 1417
IPR000048 IQ_motif_EF-hand-BS 950 970
IPR000048 IQ_motif_EF-hand-BS 1044 1062
IPR000048 IQ_motif_EF-hand-BS 867 885
IPR000048 IQ_motif_EF-hand-BS 1091 1107
IPR000048 IQ_motif_EF-hand-BS 1115 1127
IPR000048 IQ_motif_EF-hand-BS 1163 1180
IPR000048 IQ_motif_EF-hand-BS 997 1011
IPR001715 CH_dom 516 608
IPR001715 CH_dom 645 771
No external refs found!