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  5. Aop_g05184

Aop_g05184


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05184
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Als_g23705 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21883.t1 Aspi01Gene21883 transcription factor *(CLAUSA) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Len_g59679 No alias transcription factor *(CLAUSA) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007773 PHL1 not classified & original description: CDS=638-1480 0.02 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 41 91
No external refs found!