Aop_g05085


Description : not classified & original description: none


Gene families : OG0005274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005274_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05085

Target Alias Description ECC score Gene Family Method Actions
AT1G16080 No alias unknown protein; LOCATED IN: apoplast, chloroplast... 0.07 OrthoFinder output from all 47 species
Adi_g015243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16297.t1 Aspi01Gene16297 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G037500.1 Ceric.06G037500 not classified & original description: pacid=50620266... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000293.24 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre10.g435850 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g06665 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g10490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016093001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os08g16570.1 LOC_Os08g16570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g08101 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10436923g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g14820.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06985 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo166437 No alias No description available 0.08 OrthoFinder output from all 47 species
Solyc03g117740.3.1 Solyc03g117740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12984 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10708 No alias protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!