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  5. Aop_g05001

Aop_g05001


Description : not classified & original description: none


Gene families : OG0011508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05001
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Adi_g103454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G066200.1 Ceric.30G066200 not classified & original description: pacid=50608134... 0.08 OrthoFinder output from all 47 species
Dde_g26322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11885 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 627 656
IPR002885 Pentatricopeptide_repeat 102 125
IPR002885 Pentatricopeptide_repeat 900 922
IPR002885 Pentatricopeptide_repeat 797 821
IPR002885 Pentatricopeptide_repeat 127 173
IPR002885 Pentatricopeptide_repeat 826 873
IPR002885 Pentatricopeptide_repeat 523 572
IPR002885 Pentatricopeptide_repeat 227 274
IPR002885 Pentatricopeptide_repeat 426 472
IPR002885 Pentatricopeptide_repeat 724 771
IPR002885 Pentatricopeptide_repeat 327 374
No external refs found!