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  5. Aop_g04989

Aop_g04989


Description : component *(MTR3/RRP41L) of exosome EXO9 core complex & original description: none


Gene families : OG0006439 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04989

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G028600.1 Ceric.23G028600 component *(MTR3/RRP41L) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Cre17.g697624 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.01 OrthoFinder output from all 47 species
Dde_g05700 No alias component *(MTR3/RRP41L) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Gb_13188 No alias component MTR3/RRP41L of exosome EXO9 core complex 0.03 OrthoFinder output from all 47 species
Solyc06g005860.3.1 Solyc06g005860 component MTR3/RRP41L of exosome EXO9 core complex 0.03 OrthoFinder output from all 47 species
Zm00001e035628_P002 Zm00001e035628 component MTR3/RRP41L of exosome EXO9 core complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 41 168
IPR015847 ExoRNase_PH_dom2 172 232
No external refs found!