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  5. Aop_g04918

Aop_g04918


Description : tRNA 4-demethylwyosine synthase *(TYW1) & original description: none


Gene families : OG0006618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04918

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009707001 No alias S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine... 0.04 OrthoFinder output from all 47 species
Lfl_g35032 No alias tRNA 4-demethylwyosine synthase *(TYW1) & original... 0.03 OrthoFinder output from all 47 species
MA_183671g0010 No alias S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine... 0.02 OrthoFinder output from all 47 species
Ore_g07642 No alias tRNA 4-demethylwyosine synthase *(TYW1) & original... 0.02 OrthoFinder output from all 47 species
Smo169856 No alias S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine... 0.02 OrthoFinder output from all 47 species
Spa_g06044 No alias tRNA 4-demethylwyosine synthase *(TYW1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR013917 tRNA_wybutosine-synth 680 743
IPR007197 rSAM 496 677
IPR008254 Flavodoxin/NO_synth 194 335
No external refs found!