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Aliases : PDR6, ATPDR6
Description : subfamily ABCG transporter & original description: none
Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g09079 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g039230 | ABCG40, PDR12,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g33432 | ABCG40, PDR12,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene72848.t1 | ABCG40, PDR12,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0198.g057417 | PDR11, ATPDR11 | subfamily ABCG transporter & original description: CDS=1-4590 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g32414 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g25305 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004775 | PDR6, ATPDR6 | subfamily ABCG transporter & original description: CDS=697-5283 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013064 | ABCG40, PDR12,... | subfamily ABCG transporter & original description: CDS=213-3857 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0107.g020342 | PEN3, ABCG36,... | subfamily ABCG transporter & original description: CDS=1195-5658 | 0.01 | OrthoFinder output from all 47 species | |
| Smo429390 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| MF | GO:0140359 | ABC-type transporter activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR043926 | ABCG_dom | 394 | 447 |
| IPR043926 | ABCG_dom | 1084 | 1142 |
| IPR003439 | ABC_transporter-like_ATP-bd | 904 | 1055 |
| IPR029481 | ABC_trans_N | 103 | 154 |
| IPR013581 | PDR_assoc | 733 | 797 |
| IPR003439 | ABC_transporter-like_ATP-bd | 179 | 360 |
| IPR013525 | ABC_2_trans | 516 | 727 |
| IPR013525 | ABC_2_trans | 1201 | 1413 |
| No external refs found! |