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  5. Aop_g04658

Aop_g04658 (SUA)


Aliases : SUA

Description : not classified & original description: none


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04658

Target Alias Description ECC score Gene Family Method Actions
Adi_g058381 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105523 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34129.t1 SUA, Aspi01Gene34129 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.03 OrthoFinder output from all 47 species
Ehy_g02935 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20662 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g55563 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g09118 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16565 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20001 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49398 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 470 536
IPR000504 RRM_dom 313 371
IPR041591 OCRE 614 663
No external refs found!