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  5. Aop_g04300

Aop_g04300 (PHIP1)


Aliases : PHIP1

Description : phragmoplastin-interacting factor *(PHIP1) & original description: none


Gene families : OG0002968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04300

Target Alias Description ECC score Gene Family Method Actions
Gb_35169 PHIP1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g03140.1 PHIP1, LOC_Os03g03140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_110989g0010 PHIP1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g18421 PHIP1 phragmoplastin-interacting factor *(PHIP1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g25025 No alias phragmoplastin-interacting factor *(PHIP1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000171_P001 PHIP1, Zm00001e000171 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 156 225
IPR000504 RRM_dom 256 320
IPR001878 Znf_CCHC 345 361
No external refs found!