Aop_g03834

Description : not classified & original description: none

Gene families : OG0013707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013707_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g03834
Cluster	HCCA: Cluster_269

Target	Alias	Description	ECC score	Gene Family Method
Als_g18520	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G051500.1	Ceric.01G051500	not classified & original description: pacid=50590988...	0.06	OrthoFinder output from all 47 species
Dac_g04282	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g23245	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g43617	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005720	No alias	not classified & original description: CDS=1-3162	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	507	552
IPR002885	Pentatricopeptide_repeat	136	182
IPR002885	Pentatricopeptide_repeat	708	753
IPR002885	Pentatricopeptide_repeat	370	417
IPR002885	Pentatricopeptide_repeat	340	368
IPR002885	Pentatricopeptide_repeat	211	233
IPR002885	Pentatricopeptide_repeat	239	269
IPR002885	Pentatricopeptide_repeat	581	601
IPR002885	Pentatricopeptide_repeat	812	841
IPR002885	Pentatricopeptide_repeat	312	335
IPR002885	Pentatricopeptide_repeat	473	503
IPR002885	Pentatricopeptide_repeat	445	468

External Links

No external refs found!