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  5. Aop_g03738

Aop_g03738


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g03738
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Als_g17022 No alias non-SNARE-type phytolongin & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010547 No alias non-SNARE-type phytolongin & original description: CDS=152-1201 0.04 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g03533 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15032 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14095 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07277 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25380 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04173 No alias non-SNARE-type phytolongin & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022381 No alias non-SNARE-type phytolongin & original description: CDS=1-828 0.02 OrthoFinder output from all 47 species
Spa_g00933 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10247 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10249 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029159_P001 Zm00001e029159 non-SNARE-type phytolongin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 94
No external refs found!