Aop_g02925 (EDA16)

Aliases : EDA16

Description : chromatin remodeling factor *(Ris1) & original description: none

Gene families : OG0003006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g02925
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g046237	No alias	Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dde_g00960	EDA16	chromatin remodeling factor *(Ris1) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os08g08220.1	LOC_Os08g08220	chromatin remodeling factor (Rad5). chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Pir_g17386	No alias	chromatin remodeling factor *(Ris1) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27460	EDA16	chromaTin remodeling factor *(Ris1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e021657_P003	Zm00001e021657	chromatin remodeling factor (Rad5). chromatin remodeling...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	377	771
IPR001650	Helicase_C	929	1028

External Links

No external refs found!