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Aliases : PGY1
Description : component *(uL1) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00167280 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00163590 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
| AT1G08360 | No alias | Ribosomal protein L1p/L10e family | 0.18 | OrthoFinder output from all 47 species | |
| AT2G27530 | PGY1 | Ribosomal protein L1p/L10e family | 0.19 | OrthoFinder output from all 47 species | |
| AT5G22440 | No alias | Ribosomal protein L1p/L10e family | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g012505 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g053018 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106775 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g36055 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18263 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Ala_g38886 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016098 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025561 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g08043 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g27630 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g36488 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g66373 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G006900.1 | Ceric.18G006900 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.34G055700.1 | Ceric.34G055700 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020697.31 | No alias | 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica | 0.11 | OrthoFinder output from all 47 species | |
| Cre02.g101350 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.25 | OrthoFinder output from all 47 species | |
| Dac_g03072 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g25407 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g31583 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03488 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g51102 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01033841001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.2 | OrthoFinder output from all 47 species | |
| GSVIVT01036128001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_13744 | No alias | component RPL10a of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Gb_28506 | No alias | component RPL10a of LSU proteome component | 0.17 | OrthoFinder output from all 47 species | |
| LOC_Os01g64090.1 | LOC_Os01g64090 | component RPL10a of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os02g21660.1 | LOC_Os02g21660 | component RPL10a of LSU proteome component | 0.17 | OrthoFinder output from all 47 species | |
| LOC_Os08g44380.1 | LOC_Os08g44380 | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g44450.2 | LOC_Os08g44450 | component RPL10a of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Len_g04149 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06380 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g06413 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26241 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_12000g0010 | No alias | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| MA_71921g0010 | No alias | component RPL10a of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Mp3g07870.1 | No alias | component RPL10a of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
| Msp_g00232 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Msp_g39894 | PGY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03987 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g18372 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g02698 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c20_19190V3.1 | Pp3c20_19190 | Ribosomal protein L1p/L10e family | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_12730V3.1 | Pp3c23_12730 | Ribosomal protein L1p/L10e family | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g26683 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g27325 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g34689 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56380 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0106.g020220 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12736 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Sam_g26155 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Smo230302 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc01g009520.4.1 | Solyc01g009520 | component RPL10a of LSU proteome component | 0.22 | OrthoFinder output from all 47 species | |
| Solyc06g074300.4.1 | Solyc06g074300 | component RPL10a of LSU proteome component | 0.18 | OrthoFinder output from all 47 species | |
| Solyc11g068420.2.1 | Solyc11g068420 | component RPL10a of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| Spa_g08346 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g08347 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.19 | OrthoFinder output from all 47 species | |
| Spa_g08353 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g53937 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g10501 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g39928 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003939_P002 | Zm00001e003939 | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019205_P001 | Zm00001e019205 | component RPL10a of LSU proteome component | 0.2 | OrthoFinder output from all 47 species | |
| Zm00001e022063_P001 | Zm00001e022063 | component RPL10a of LSU proteome component | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 21 | 210 |
| No external refs found! |