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  5. Aop_g01799

Aop_g01799


Description : regulatory GTPase (NOG1) of LSU processome & original description: none


Gene families : OG0004754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01799
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00058660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G50920 No alias Nucleolar GTP-binding protein 0.02 OrthoFinder output from all 47 species
Adi_g020856 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025335 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Cba_g68683 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G116000.1 Ceric.01G116000 regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Ehy_g11193 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.04 OrthoFinder output from all 47 species
LOC_Os06g09570.1 LOC_Os06g09570 NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g02079 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.06 OrthoFinder output from all 47 species
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.02 OrthoFinder output from all 47 species
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.01 OrthoFinder output from all 47 species
Msp_g14977 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.04 OrthoFinder output from all 47 species
Nbi_g11011 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Pir_g28671 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g081010.4.1 Solyc01g081010 NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Spa_g09142 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.05 OrthoFinder output from all 47 species
Tin_g04665 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Zm00001e030762_P002 Zm00001e030762 NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e036251_P001 Zm00001e036251 NOG1 LSU processome regulatory GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR041623 NOG1_N 6 165
IPR010674 NOG1_Rossman_fold_dom 235 292
IPR012973 NOG_C 410 463
No external refs found!