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  5. Aop_g01709

Aop_g01709


Description : subunit beta of succinyl-CoA ligase heterodimer & original description: none


Gene families : OG0004314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00119600 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid... 0.02 OrthoFinder output from all 47 species
Cba_g00954 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Cre17.g703700 No alias Cellular respiration.tricarboxylic acid... 0.01 OrthoFinder output from all 47 species
LOC_Os02g40830.1 LOC_Os02g40830 subunit beta of succinyl-CoA ligase heterodimer 0.02 OrthoFinder output from all 47 species
Solyc06g083790.3.1 Solyc06g083790 subunit beta of succinyl-CoA ligase heterodimer 0.02 OrthoFinder output from all 47 species
Tin_g05127 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 29 237
IPR005811 CoA_ligase 297 417
No external refs found!