1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g08758

Lfl_g08758 (DRB2)


Aliases : DRB2

Description : regulatory protein *(DRB2) of miRNA biogenesis pathway & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g08758

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00248180 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g014057 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00806 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05097 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38251.t1 DRB3, Aspi01Gene38251 regulatory protein *(DRB2) of miRNA bioGenesis pathway &... 0.03 OrthoFinder output from all 47 species
Cba_g04523 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
GSVIVT01021904001 DRB3 Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os05g24160.1 DRB1, HYL1,... component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.02 OrthoFinder output from all 47 species
Len_g23544 DRB1, HYL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426156g0010 DRB2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g056100.3.1 DRB2, Solyc05g056100 Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g04581 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019310 inositol catabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050113 inositol oxygenase activity IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 2 68
IPR014720 dsRBD_dom 89 152
No external refs found!