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  5. Aop_g01343

Aop_g01343 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : not classified & original description: none


Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01343

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00176080 ATGCN1, GCN1,... ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g31359 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01954 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22362 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04312 ATGCN1, GCN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07883 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04071 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017809_P001 ATGCN1, GCN1,... ABC transporter F family member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 90 245
IPR032781 ABC_tran_Xtn 284 360
IPR003439 ABC_transporter-like_ATP-bd 401 531
No external refs found!