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  5. Aop_g01129

Aop_g01129


Description : deadenylase component *(CAF1) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0000833 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g01129
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Aev_g07107 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Als_g01479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43713 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037558 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Cba_g06366 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Cba_g08602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51611 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Ehy_g03366 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Lfl_g03678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09969 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Nbi_g02703 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.05 OrthoFinder output from all 47 species
Ore_g08887 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.04 OrthoFinder output from all 47 species
Ore_g27312 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Sam_g08624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g045130.2.1 Solyc11g045130 Probable CCR4-associated factor 1 homolog 7... 0.03 OrthoFinder output from all 47 species
Spa_g06339 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 16 137
No external refs found!