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  5. Aop_g00814

Aop_g00814 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00814

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g26355 LOP1, TRN1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene26671.t1 LOP1, TRN1,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene68465.t1 LOP1, TRN1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36583 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G016000.1 Ceric.18G016000 not classified & original description: pacid=50622446... 0.04 OrthoFinder output from all 47 species
Ceric.18G016100.1 LOP1, TRN1,... not classified & original description: pacid=50621243... 0.05 OrthoFinder output from all 47 species
Ceric.18G016400.1 Ceric.18G016400 not classified & original description: pacid=50620952... 0.02 OrthoFinder output from all 47 species
Ceric.18G016500.1 Ceric.18G016500 not classified & original description: pacid=50621773... 0.02 OrthoFinder output from all 47 species
Ceric.20G043500.1 LOP1, TRN1,... not classified & original description: pacid=50566189... 0.03 OrthoFinder output from all 47 species
Dac_g05165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08979 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14654 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40231 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06746 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!