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  5. Aop_g00668

Aop_g00668 (ATIWS1, IWS1)


Aliases : ATIWS1, IWS1

Description : component *(IWS1) of SPT6-IWS1 transcription elongation complex & original description: none


Gene families : OG0004677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00668

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.27 ATIWS1, IWS1 Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre10.g441000 ATIWS1, IWS1 Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g24525 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Gb_01207 ATIWS1, IWS1 component IWS1 of SPT6-IWS1 transcription elongation complex 0.03 OrthoFinder output from all 47 species
Len_g22285 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
Lfl_g10700 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Nbi_g05782 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Ore_g27570 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Spa_g48259 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.03 OrthoFinder output from all 47 species
Tin_g12224 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 327 367
No external refs found!