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  5. Aop_g00613

Aop_g00613 (RPT3)


Aliases : RPT3

Description : regulatory component *(RPT3) of 26S proteasome & original description: none


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00613

Target Alias Description ECC score Gene Family Method Actions
AT5G58290 RPT3 regulatory particle triple-A ATPase 3 0.03 OrthoFinder output from all 47 species
Als_g27997 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.02 OrthoFinder output from all 47 species
Cre09.g402450 RPT3 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Ehy_g25311 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ehy_g25312 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g21970.1 RPT3, LOC_Os02g21970 regulatory component RPT3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Lfl_g02896 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp8g10830.1 RPT3 regulatory component RPT3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e014107_P001 RPT3, Zm00001e014107 regulatory component RPT3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e022619_P001 RPT3, Zm00001e022619 regulatory component RPT3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 200 333
IPR041569 AAA_lid_3 356 398
IPR032501 Prot_ATP_ID_OB_C 87 142
No external refs found!