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  5. Cpa|evm.model.tig00000053.4

Cpa|evm.model.tig00000053.4


Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana


Gene families : OG_01_0000652 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000652_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000053.4
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00188660 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
AT1G16800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT2G19120 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Archaeplastida
AT4G30100 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Archaeplastida
MA_13389g0020 No alias helicase (SEN1) 0.02 Archaeplastida
MA_208026g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_88596g0010 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e002590_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e012950_P003 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!