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  5. Aop_g00412

Aop_g00412 (PUB14, ATPUB14)


Aliases : PUB14, ATPUB14

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00412

Target Alias Description ECC score Gene Family Method Actions
Als_g14928 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04849 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G025200.1 Ceric.08G025200 not classified & original description: pacid=50638798... 0.06 OrthoFinder output from all 47 species
Ceric.13G074400.1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49950.1 LOC_Os02g49950 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Smo84320 PUB13, ATPUB13 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 173 210
IPR000225 Armadillo 45 84
No external refs found!