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  5. Aop_g00408

Aop_g00408


Description : prolyl hydroxylase & original description: none


Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00408

Target Alias Description ECC score Gene Family Method Actions
AT4G33910 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 OrthoFinder output from all 47 species
Cre01.g014650 AT-P4H-2 Protein modification.hydroxylation.prolyl hydroxylase 0.01 OrthoFinder output from all 47 species
Cre08.g369300 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
Cre10.g459900 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.01 OrthoFinder output from all 47 species
Pnu_g19366 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18942 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26622 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008483_P001 AT-P4H-1, Zm00001e008483 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR044862 Pro_4_hyd_alph_FE2OG_OXY 145 262
No external refs found!