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  5. Aop_g00398

Aop_g00398


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00398

Target Alias Description ECC score Gene Family Method Actions
Adi_g059708 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00745 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33018 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19588 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06293 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02489 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003403_P001 Zm00001e003403 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 32 123
No external refs found!