Lfl_g08646 (TOR)

Aliases : TOR

Description : Nonsense-Mediated mRNA Decay kinase *(SMG1) & original description: none

Gene families : OG0006567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006567_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g08646
Cluster	HCCA: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00199900	TOR,...	Protein modification.phosphorylation.atypical kinase...	0.05	OrthoFinder output from all 47 species
Aev_g43498	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.03	OrthoFinder output from all 47 species
Ala_g07351	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.13	OrthoFinder output from all 47 species
Als_g14760	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.04	OrthoFinder output from all 47 species
Aop_g68698	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene36734.t1	TOR, Aspi01Gene36734	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0065.g035877	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.04	OrthoFinder output from all 47 species
Ceric.04G017600.1	TOR, Ceric.04G017600	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.12	OrthoFinder output from all 47 species
Cre13.g572050	TOR	Protein modification.phosphorylation.atypical kinase...	0.05	OrthoFinder output from all 47 species
Dde_g13606	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.06	OrthoFinder output from all 47 species
GSVIVT01031879001	TOR	Protein modification.phosphorylation.atypical kinase...	0.1	OrthoFinder output from all 47 species
Gb_14475	TOR	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.08	OrthoFinder output from all 47 species
LOC_Os03g52794.1	LOC_Os03g52794	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.06	OrthoFinder output from all 47 species
Len_g14801	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.03	OrthoFinder output from all 47 species
MA_10355154g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_10363121g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_124366g0010	TOR	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.06	OrthoFinder output from all 47 species
Mp4g20990.1	TOR	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.05	OrthoFinder output from all 47 species
Msp_g17743	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.08	OrthoFinder output from all 47 species
Pir_g18620	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g18931	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025603	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.03	OrthoFinder output from all 47 species
Sam_g27855	No alias	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.03	OrthoFinder output from all 47 species
Smo88215	TOR	Protein modification.phosphorylation.atypical kinase...	0.05	OrthoFinder output from all 47 species
Solyc01g109080.3.1	TOR, Solyc01g109080	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.04	OrthoFinder output from all 47 species
Spa_g22211	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.08	OrthoFinder output from all 47 species
Tin_g26955	TOR	Nonsense-Mediated mRNA Decay kinase *(SMG1) & original...	0.06	OrthoFinder output from all 47 species
Zm00001e005605_P001	TOR, Zm00001e005605	SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEA	Interproscan
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	None	Extended
BP	GO:0006402	mRNA catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000403	PI3/4_kinase_cat_dom	2002	2278
IPR003152	FATC_dom	2597	2626
IPR031559	SMG1	671	1150

External Links

No external refs found!

Lfl_g08646 (TOR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation