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  5. Aop_g00128

Aop_g00128 (ATG8F)


Aliases : ATG8F

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00128
Cluster HCCA: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00225880 ATG8F,... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
AT2G45170 ATG8E, ATATG8E AUTOPHAGY 8E 0.05 OrthoFinder output from all 47 species
Als_g25085 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Als_g41398 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0221.g058729 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Dac_g11854 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Dde_g01220 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Gb_08297 ATG8C ATG8 autophagosome ubiquitin-fold protein 0.04 OrthoFinder output from all 47 species
Len_g26188 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Msp_g03687 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Msp_g17208 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.09 OrthoFinder output from all 47 species
Msp_g25613 ATG8E, ATATG8E autophagosome ubiquitin-fold protein *(ATG8) & original... 0.07 OrthoFinder output from all 47 species
Nbi_g05523 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g08640 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Pir_g56569 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012694 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36881 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Spa_g02744 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 47 species
Spa_g52469 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.06 OrthoFinder output from all 47 species
Tin_g38203 ATG8F autophagosome ubiquiTin-fold protein *(ATG8) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e010463_P001 ATG8C, Zm00001e010463 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 16 119
No external refs found!