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  5. Aop_g00107

Aop_g00107


Description : component *(SDH6) of succinate dehydrogenase complex & original description: none


Gene families : OG0005138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g00107
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00198060 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid cycle.succinate... 0.03 OrthoFinder output from all 47 species
AT1G08480 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.09 OrthoFinder output from all 47 species
Ala_g10064 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.03 OrthoFinder output from all 47 species
Als_g01389 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028464001 No alias Cellular respiration.tricarboxylic acid cycle.succinate... 0.02 OrthoFinder output from all 47 species
Gb_25569 No alias component SDH6 of succinate dehydrogenase complex 0.04 OrthoFinder output from all 47 species
Len_g49112 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g12391 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.01 OrthoFinder output from all 47 species
MA_3203075g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g64026 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.04 OrthoFinder output from all 47 species
Sam_g06718 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.02 OrthoFinder output from all 47 species
Smo403366 No alias Cellular respiration.tricarboxylic acid cycle.succinate... 0.03 OrthoFinder output from all 47 species
Solyc06g073900.3.1 Solyc06g073900 component SDH6 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
Solyc11g071790.2.1 Solyc11g071790 component SDH6 of succinate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
Spa_g15049 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.06 OrthoFinder output from all 47 species
Tin_g10480 No alias component *(SDH6) of succinate dehydrogenase complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e021860_P001 Zm00001e021860 component SDH6 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!