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  5. Lfl_g07810

Lfl_g07810


Description : regulatory protein *(MAS2) of rDNA transcription & original description: none


Gene families : OG0004955 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07810

Target Alias Description ECC score Gene Family Method Actions
Aop_g25509 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53110.t1 Aspi01Gene53110 regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Dac_g14767 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.05 OrthoFinder output from all 47 species
LOC_Os09g28220.1 LOC_Os09g28220 rDNA transcriptional regulator (MAS2) 0.02 OrthoFinder output from all 47 species
Smo439298 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR009269 NKAP_C 559 657
No external refs found!