1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g07776

Lfl_g07776 (ATHSF1, HSF1, HSFA1A, ATHSFA1A)


Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07776

Target Alias Description ECC score Gene Family Method Actions
Aev_g10054 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27045 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25683 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26655 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65605.t1 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05832 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10764 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15368 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20790 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13545 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013107001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
GSVIVT01035385001 HSFA2, ATHSFA2 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58160.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g63750.1 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 OrthoFinder output from all 47 species
Lfl_g03202 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12818 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18319 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01141 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19596 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24815 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48747 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32244 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11679 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06000 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g16998 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353 HSFA1E, ATHSFA1E HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06153 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07137 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19500 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 60 149
No external refs found!