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  5. Lfl_g07415

Lfl_g07415


Description : not classified & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07415

Target Alias Description ECC score Gene Family Method Actions
AT1G20300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G22670 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g023342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22080 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24733 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12835 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.03 OrthoFinder output from all 47 species
Aob_g26096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13623.t1 Aspi01Gene13623 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27701.t1 EMB2261, Aspi01Gene27701 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63897.t1 Aspi01Gene63897 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037813 No alias not classified & original description: CDS=1-1092 0.03 OrthoFinder output from all 47 species
Cba_g02658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G098700.1 Ceric.03G098700 not classified & original description: pacid=50572397... 0.03 OrthoFinder output from all 47 species
Ceric.24G045100.1 Ceric.24G045100 not classified & original description: pacid=50628969... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.24 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g07022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09971 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.03 OrthoFinder output from all 47 species
Dcu_g32634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
GSVIVT01011779001 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.02 OrthoFinder output from all 47 species
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.02 OrthoFinder output from all 47 species
GSVIVT01027384001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
Gb_28709 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05860.1 LOC_Os01g05860 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52220.1 LOC_Os02g52220 Pentatricopeptide repeat-containing protein At1g73400,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53490.1 LOC_Os03g53490 Pentatricopeptide repeat-containing protein At3g22670,... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55090.1 LOC_Os04g55090 Pentatricopeptide repeat-containing protein At1g80550,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28180.1 LOC_Os08g28180 Pentatricopeptide repeat-containing protein At2g13420,... 0.02 OrthoFinder output from all 47 species
Len_g24369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430437g0020 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
MA_12748g0020 No alias Pentatricopeptide repeat-containing protein At1g79540... 0.02 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
MA_455059g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
MA_953698g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g07149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g01378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013104 No alias not classified & original description: CDS=32-2083 0.03 OrthoFinder output from all 47 species
Sam_g24474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g097840.2.1 Solyc09g097840 Pentatricopeptide repeat-containing protein At5g18390,... 0.02 OrthoFinder output from all 47 species
Spa_g10895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.02 OrthoFinder output from all 47 species
Zm00001e015034_P001 Zm00001e015034 Pentatricopeptide repeat-containing protein At3g04130,... 0.03 OrthoFinder output from all 47 species
Zm00001e036197_P001 Zm00001e036197 Pentatricopeptide repeat-containing protein At1g71060,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 688 742
IPR002885 Pentatricopeptide_repeat 630 678
IPR002885 Pentatricopeptide_repeat 351 398
IPR002885 Pentatricopeptide_repeat 247 293
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 561 608
IPR002885 Pentatricopeptide_repeat 212 240
IPR002885 Pentatricopeptide_repeat 457 486
IPR002885 Pentatricopeptide_repeat 416 445
IPR002885 Pentatricopeptide_repeat 315 341
No external refs found!