Cre17.g717800

Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.NUP93 scaffold nucleoporin

Gene families : OG_01_0004324 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g717800
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00107p00047780	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.02	Archaeplastida
Gb_32484	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.03	Archaeplastida
LOC_Os03g22690.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.03	Archaeplastida
MA_10435434g0020	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.02	Archaeplastida
Mp2g23730.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.06	Archaeplastida
Pp3c6_19740V3.1	No alias	Nucleoporin interacting component (Nup93/Nic96-like)...	0.06	Archaeplastida
Solyc04g016240.3.1	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.06	Archaeplastida
Zm00001e001657_P002	No alias	NUP93 scaffold nucleoporin of nuclear pore complex	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
MF	GO:0017056	structural constituent of nuclear pore	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007231	Nucleoporin_int_Nup93/Nic96	243	378
IPR007231	Nucleoporin_int_Nup93/Nic96	457	909

External Links

No external refs found!