Lfl_g07112


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07112

Target Alias Description ECC score Gene Family Method Actions
Adi_g057084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18745 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053516 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G076300.1 Ceric.15G076300 not classified & original description: pacid=50639367... 0.03 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.03 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g10603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16778 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26505 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10319 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007662 CRR22 not classified & original description: CDS=517-2514 0.04 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15075 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 448 478
IPR002885 Pentatricopeptide_repeat 783 812
IPR002885 Pentatricopeptide_repeat 818 846
IPR002885 Pentatricopeptide_repeat 191 215
IPR002885 Pentatricopeptide_repeat 855 879
IPR002885 Pentatricopeptide_repeat 654 679
IPR002885 Pentatricopeptide_repeat 116 163
IPR002885 Pentatricopeptide_repeat 333 380
IPR002885 Pentatricopeptide_repeat 680 726
IPR002885 Pentatricopeptide_repeat 217 263
IPR002885 Pentatricopeptide_repeat 563 609
No external refs found!