MA_10426788g0030


Description : 16.2.1.7 secondary metabolism.phenylpropanoids.lignin biosynthesis.CCR1 Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis. cinnamoyl coa reductase 1 (CCR1)


Gene families : OG_01_0000010 (Gene family) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10426788g0030
Cluster HCCA cluster: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
AT1G25460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Gene family
AT1G66800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Gene family
AT1G68540 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Gene family
AT1G76470 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Gene family
AT1G80820 CCR2, ATCCR2 cinnamoyl coa reductase 0.02 Gene family
GSVIVT01000822001 No alias 16.2 secondary metabolism.phenylpropanoids... 0.02 Gene family
GSVIVT01000844001 No alias 16.2 secondary metabolism.phenylpropanoids... 0.02 Gene family
GSVIVT01012378001 No alias 26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol... 0.03 Gene family
GSVIVT01012383001 No alias 26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol... 0.03 Gene family
GSVIVT01012392001 No alias 26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol... 0.03 Gene family
GSVIVT01012394001 No alias 26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol... 0.03 Gene family
GSVIVT01013432001 No alias 16.2 secondary metabolism.phenylpropanoids... 0.02 Gene family
LOC_Os04g53850 Os04g0630800 16.8.1.2 secondary... 0.03 Gene family
LOC_Os06g41840 Os06g0623600 16.2 secondary metabolism.phenylpropanoids... 0.02 Gene family
MA_10432862g0010 No alias 16.8.3.1 secondary... 0.02 Gene family
MA_164881g0010 No alias 16.8.1.2 secondary... 0.02 Gene family
Zm00001d015513 GRMZM2G057328 16.2.1.7 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Zm00001d020957 GRMZM2G050076 16.2 secondary metabolism.phenylpropanoids... 0.02 Gene family
Zm00001d032152 GRMZM2G131205 16.2.1.7 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan
MF GO:0050662 coenzyme binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 5 146
No external refs found!