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  5. Lfl_g07071

Lfl_g07071


Description : not classified & original description: none


Gene families : OG0008372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07071

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.02 OrthoFinder output from all 47 species
Adi_g021144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61177.t1 Aspi01Gene61177 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32696 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 OrthoFinder output from all 47 species
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.03 OrthoFinder output from all 47 species
Ore_g29551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 349 458
IPR002885 Pentatricopeptide_repeat 289 337
IPR002885 Pentatricopeptide_repeat 464 511
IPR002885 Pentatricopeptide_repeat 184 228
IPR002885 Pentatricopeptide_repeat 258 287
No external refs found!