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  5. Lfl_g06998

Lfl_g06998


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06998

Target Alias Description ECC score Gene Family Method Actions
Aev_g06660 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g33847 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10267.t1 Aspi01Gene10267 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g09039 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09607 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g05828 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g41240.1 LOC_Os05g41240 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g29221 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19769 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39083 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06853 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005338 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006600 KAN4, ATS KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g10830 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001551_P002 Zm00001e001551 PHR1 transcription factor involved in proline synthesis... 0.01 OrthoFinder output from all 47 species
Zm00001e003093_P001 KAN4, ATS, Zm00001e003093 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 54 104
IPR025756 Myb_CC_LHEQLE 136 182
No external refs found!