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  5. Lfl_g06903

Lfl_g06903


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06903
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00214810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00065p00088770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT3G49910 No alias Translation protein SH3-like family protein 0.08 OrthoFinder output from all 47 species
AT5G67510 No alias Translation protein SH3-like family protein 0.07 OrthoFinder output from all 47 species
Adi_g015133 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g041472 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g079333 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g33821 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ala_g37339 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g58453 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g30759 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g68629 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008074 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g10903 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.06G075600.1 Ceric.06G075600 component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.25G058700.1 Ceric.25G058700 component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g26116 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dac_g27086 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g18149 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01000114001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01030972001 No alias 60S ribosomal protein L26-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_05675 No alias component RPL26 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os11g05370.1 LOC_Os11g05370 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os12g05430.1 LOC_Os12g05430 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Len_g44310 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g36187 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.07 OrthoFinder output from all 47 species
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g33144 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Msp_g37577 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g08095 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c14_25170V3.1 Pp3c14_25170 Translation protein SH3-like family protein 0.07 OrthoFinder output from all 47 species
Pp3c1_25000V3.1 Pp3c1_25000 Translation protein SH3-like family protein 0.04 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.04 OrthoFinder output from all 47 species
Ppi_g40592 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g05724 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12169 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Solyc02g064670.1.1 Solyc02g064670 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc02g092430.1.1 Solyc02g092430 component RPL26 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc03g044000.1.1 Solyc03g044000 component RPL26 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g06853 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g54872 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!