AMTR_s00021p00242690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.256

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP1-type dynamin


Gene families : OG_01_0001056 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001056_tree ,
OG_02_0000714 (LandPlants) Phylogenetic Tree(s): OG_02_0000714_tree ,
OG_03_0000709 (SeedPlants) Phylogenetic Tree(s): OG_03_0000709_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00242690
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cre05.g245950 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 Archaeplastida
GSVIVT01018380001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
MA_197340g0010 No alias DRP1-type clathrin coated vesicle dynamin 0.02 Archaeplastida
Pp3c19_3590V3.1 No alias DYNAMIN-like 1E 0.02 Archaeplastida
Zm00001e005459_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.02 Archaeplastida
Zm00001e012177_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.03 Archaeplastida
Smo183216 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 LandPlants
Zm00001e005459_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.02 LandPlants
Zm00001e012177_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.03 LandPlants
AT1G14830 DRP1C, ADL1C, DL1C, ADL5 DYNAMIN-like 1C 0.02 SeedPlants
GSVIVT01018380001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 SeedPlants
Solyc08g077360.3.1 No alias DRP1-type clathrin coated vesicle dynamin 0.01 SeedPlants
Zm00001e005459_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.02 SeedPlants
Zm00001e012177_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.03 SeedPlants
Zm00001e026477_P001 No alias DRP1-type clathrin coated vesicle dynamin 0.01 SeedPlants
Zm00001e032371_P002 No alias DRP1-type clathrin coated vesicle dynamin 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000375 Dynamin_stalk 221 496
IPR001401 Dynamin_GTPase 37 212
IPR003130 GED 513 603
No external refs found!