MA_10426444g0010


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10426444g0010
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01009789001 No alias No description available 0.02 Gene family
GSVIVT01031251001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01032721001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01033190001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os01g10800 Os01g0205200 No description available 0.02 Gene family
LOC_Os04g39410 Os04g0469400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g50950 Os05g0586900 No description available 0.03 Gene family
Smo102603 PACid_15407444 No description available 0.02 Gene family
Smo96927 PACid_15411604 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g095690.2.1 Solyc01g095690.2 No description available 0.03 Gene family
Solyc02g081900.3.1 Solyc02g081900.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d048451 GRMZM2G171994 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 724 747
IPR002885 Pentatricopeptide_repeat 220 243
IPR002885 Pentatricopeptide_repeat 523 547
IPR002885 Pentatricopeptide_repeat 118 142
IPR002885 Pentatricopeptide_repeat 789 818
IPR032867 DYW_dom 822 946
IPR002885 Pentatricopeptide_repeat 548 595
IPR002885 Pentatricopeptide_repeat 648 696
IPR002885 Pentatricopeptide_repeat 452 494
IPR002885 Pentatricopeptide_repeat 245 292
IPR002885 Pentatricopeptide_repeat 345 393
IPR002885 Pentatricopeptide_repeat 145 192
No external refs found!