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  5. Lfl_g06735

Lfl_g06735 (emb2734)


Aliases : emb2734

Description : nucleocytoplasmic import karyopherin *(IMB3) & original description: none


Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06735
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00103300 emb2734,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT5G19820 emb2734 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g11168 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
Aob_g14839 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Aob_g28680 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Aop_g03545 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12249.t1 emb2734, Aspi01Gene12249 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s1075.g096915 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Cba_g31509 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G003600.1 emb2734, Ceric.17G003600 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.26G014000.1 emb2734, Ceric.26G014000 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14555 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g04981 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g12588 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01025460001 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from all 47 species
GSVIVT01033417001 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38760.1 emb2734, LOC_Os07g38760 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Len_g16328 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
MA_10432206g0010 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Mp3g07820.1 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Ore_g30249 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Ore_g34554 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Pir_g09795 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03263 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g18585 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Smo140234 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Tin_g21538 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e035335_P001 emb2734, Zm00001e035335 IMB3 nucleocytoplasmic import karyopherin 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR041389 Importin_rep_6 782 889
IPR041653 Importin_rep_4 282 373
IPR000357 HEAT 922 950
No external refs found!