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  5. Lfl_g06679

Lfl_g06679 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: none


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06679
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g51110.1 CDC20.1, LOC_Os04g51110 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.03 OrthoFinder output from all 47 species
Ppi_g11513 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Smo229944 CDC20.2 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 310 349
IPR001680 WD40_repeat 266 298
IPR001680 WD40_repeat 399 434
IPR024977 Apc4_WD40_dom 182 237
No external refs found!