1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g06398

Lfl_g06398


Description : not classified & original description: none


Gene families : OG0001844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001844_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06398
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Adi_g044383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10130.t1 Aspi01Gene10130 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA Interproscan
BP GO:0009664 plant-type cell wall organization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 235 280
IPR006706 Extensin_dom 268 319
No external refs found!