Lfl_g06286


Description : not classified & original description: none


Gene families : OG0000031 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06286
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00189p00032350 LHCB1.3, CAB140,... Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 39 species
AT2G05070 LHCB2.2, LHCB2 photosystem II light harvesting complex gene 2.2 0.01 OrthoFinder output from all 39 species
AT2G05100 LHCB2.1, LHCB2 photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 39 species
AT3G27690 LHCB2.3, LHCB2, LHCB2.4 photosystem II light harvesting complex gene 2.3 0.01 OrthoFinder output from all 39 species
Aev_g22395 No alias component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Als_g21390 No alias component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 39 species
Aob_g02738 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aob_g04833 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aob_g07015 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aob_g08829 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aob_g13734 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aob_g18768 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aop_g14660 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aop_g16137 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aop_g23954 LHCB1.4, LHB1B1 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aop_g28499 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aop_g69021 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Aspi01Gene23121.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aspi01Gene25498.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aspi01Gene31128.t1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aspi01Gene31429.t1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aspi01Gene66566.t1 LHCB2.2, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Azfi_s0006.g010020 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Azfi_s0013.g013388 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Cba_g08707 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Cba_g21669 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Ceric.05G101100.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Ceric.10G082300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
Ceric.10G082400.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Ceric.10G082500.1 LHCB1.4, LHB1B1,... component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
Ceric.10G082600.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Ceric.10G083100.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 39 species
Ceric.10G083300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Ceric.15G047900.1 LHCB1.4, LHB1B1,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Ceric.17G067600.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Ceric.32G021300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Ceric.37G024700.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Dac_g05365 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dac_g23315 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Dac_g29163 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Dac_g29164 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Dac_g32133 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Dcu_g06028 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
GSVIVT01014439001 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 39 species
Len_g05765 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g23886 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Len_g23888 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
MA_10431300g0010 LHCB2.1, LHCB2 Chlorophyll a-b binding protein type I, chloroplastic... 0.02 OrthoFinder output from all 39 species
MA_10431300g0020 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
MA_10431300g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 39 species
MA_131587g0010 LHCB1.4, LHB1B1 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 39 species
MA_267089g0010 LHCB2.1, LHCB2 Chlorophyll a-b binding protein type I, chloroplastic... 0.02 OrthoFinder output from all 39 species
MA_97315g0010 LHCB1.5, LHB1B2 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp1g29620.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp7g06760.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp7g06770.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp7g06780.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp7g08940.1 LHCB3*1, LHCB3 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Mp7g09180.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Msp_g07998 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Msp_g16714 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g22761 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Msp_g25099 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Msp_g26835 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Msp_g28747 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Msp_g30962 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Msp_g37594 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Msp_g38912 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g05167 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 39 species
Nbi_g28439 LHCB1.4, LHB1B1 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Nbi_g34825 CAB3, AB180, LHCB1.2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Pir_g02726 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Pir_g06997 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Pir_g47176 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Pir_g52168 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Pnu_g32808 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pp3c26_6740V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0086.g018412 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Spa_g02789 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 39 species
Spa_g03449 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Spa_g21350 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Tin_g12536 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Tin_g32122 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Tin_g41925 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Zm00001e004940_P001 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Zm00001e004941_P001 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 39 species
Zm00001e020627_P001 LHCB1.5, LHB1B2,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!