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  5. Lfl_g06270

Lfl_g06270 (ATRAD21.3, SYN4)


Aliases : ATRAD21.3, SYN4

Description : mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex & original description: none


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00204930 SYN3, ATRAD21.2,... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
AMTR_s00066p00174610 ATRAD21.3, SYN4,... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
AT4G05360 No alias Zinc knuckle (CCHC-type) family protein 0.02 OrthoFinder output from all 47 species
AT5G16270 ATRAD21.3, SYN4 sister chromatid cohesion 1 protein 4 0.03 OrthoFinder output from all 47 species
Ala_g22608 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.07 OrthoFinder output from all 47 species
Als_g14846 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Aop_g18160 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Cba_g13918 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species
Cba_g30005 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Ceric.31G015800.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component *(SCC1) of... 0.06 OrthoFinder output from all 47 species
Ceric.39G042400.1 ATRAD21.3, SYN4,... not classified & original description: pacid=50582800... 0.05 OrthoFinder output from all 47 species
Dcu_g05845 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.06 OrthoFinder output from all 47 species
Dde_g47046 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Ehy_g09953 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Ehy_g29051 ATRAD21.3, SYN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004000001 ATRAD21.3, SYN4 Cell cycle.mitosis and meiosis.sister chromatid... 0.08 OrthoFinder output from all 47 species
LOC_Os04g41110.1 AtRAD21.1, SYN2,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.01 OrthoFinder output from all 47 species
LOC_Os08g16610.1 SYN3, ATRAD21.2,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.02 OrthoFinder output from all 47 species
Len_g49535 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
MA_123486g0010 ATRAD21.3, SYN4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_168879g0020 SYN3, ATRAD21.2, ATSYN3 Sister chromatid cohesion 1 protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_673714g0010 ATRAD21.3, SYN4 Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp5g04800.1 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component SCC1 of cohesin... 0.03 OrthoFinder output from all 47 species
Ore_g09799 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Ore_g39025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41601 ATRAD21.3, SYN4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62398 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013377 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Sam_g27905 No alias mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species
Smo122410 ATRAD21.3, SYN4 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Solyc11g008740.2.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.05 OrthoFinder output from all 47 species
Spa_g52596 ATRAD21.3, SYN4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54902 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.03 OrthoFinder output from all 47 species
Zm00001e018959_P001 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.07 OrthoFinder output from all 47 species
Zm00001e028559_P002 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding Toggle navigationIEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006909 Rad21/Rec8_C_eu 1344 1393
IPR006910 Rad21_Rec8_N 1 100
No external refs found!