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  5. Cre16.g678100

Cre16.g678100


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.VPS28 component


Gene families : OG_01_0004378 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g678100
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00095460 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 Archaeplastida
AT4G05000 VPS28-2, VPS28-1 Vacuolar protein sorting-associated protein VPS28 family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020850.3 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 Archaeplastida
MA_10432906g0010 No alias component VPS28 of ESCRT-I complex 0.04 Archaeplastida
Pp3c14_20060V3.1 No alias Vacuolar protein sorting-associated protein VPS28 family protein 0.03 Archaeplastida
Pp3c17_18750V3.1 No alias Vacuolar protein sorting-associated protein VPS28 family protein 0.03 Archaeplastida
Solyc02g080270.3.1 No alias component VPS28 of ESCRT-I complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007143 Vps28 37 222
No external refs found!