Lfl_g06127


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096184 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34629 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36451 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07022 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34788.t1 CRK8, Aspi01Gene34788 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39079.t1 Aspi01Gene39079 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008760 No alias not classified & original description: CDS=1-2934 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026450 No alias not classified & original description: CDS=1-3138 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.01 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.01 OrthoFinder output from all 47 species
Azfi_s0444.g070599 No alias not classified & original description: CDS=1-3282 0.03 OrthoFinder output from all 47 species
Azfi_s1107.g097662 No alias not classified & original description: CDS=1-2811 0.03 OrthoFinder output from all 47 species
Cba_g02644 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g54717 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.01 OrthoFinder output from all 47 species
Ceric.02G054200.1 Ceric.02G054200 not classified & original description: pacid=50585961... 0.02 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.11G015200.1 Ceric.11G015200 not classified & original description: pacid=50595684... 0.03 OrthoFinder output from all 47 species
Ceric.12G021300.1 Ceric.12G021300 not classified & original description: pacid=50600778... 0.03 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.03 OrthoFinder output from all 47 species
Ceric.31G066800.1 Ceric.31G066800 not classified & original description: pacid=50573808... 0.03 OrthoFinder output from all 47 species
Ceric.34G000500.1 Ceric.34G000500 not classified & original description: pacid=50623432... 0.03 OrthoFinder output from all 47 species
Ceric.36G048700.1 Ceric.36G048700 not classified & original description: pacid=50569051... 0.02 OrthoFinder output from all 47 species
Ceric.38G024200.1 Ceric.38G024200 not classified & original description: pacid=50580039... 0.03 OrthoFinder output from all 47 species
Dac_g05720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29399 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08951 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26854 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g36344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48863 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18372 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21502 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30825 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01018877001 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Gb_06177 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.02 OrthoFinder output from all 47 species
LOC_Os05g45850.1 LOC_Os05g45850 Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46770.1 LOC_Os07g46770 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Msp_g01185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09691 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g32360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g20273 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g21891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63028 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g04487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g23109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30635 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
Spa_g02192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17180 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 183 228
IPR002885 Pentatricopeptide_repeat 75 123
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 385 428
IPR002885 Pentatricopeptide_repeat 526 555
No external refs found!