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  5. Lfl_g06062

Lfl_g06062 (ATRGTA1, RGTA1)


Aliases : ATRGTA1, RGTA1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06062

Target Alias Description ECC score Gene Family Method Actions
Dcu_g03999 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ehy_g02507 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009190001 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
GSVIVT01009191001 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Gb_29233 ATRGTA1, RGTA1 subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.03 OrthoFinder output from all 47 species
Solyc04g076430.3.1 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 123 151
IPR002088 Prenyl_trans_a 45 74
IPR002088 Prenyl_trans_a 205 234
IPR002088 Prenyl_trans_a 88 117
IPR002088 Prenyl_trans_a 159 189
IPR001611 Leu-rich_rpt 491 505
IPR025875 Leu-rich_rpt_4 447 485
No external refs found!